Pathway Inspector

Close Home Contact us Documentation About Citation Help

Brought to you by: Edmund Mach Foundation - Computational Biology
☰ Pathway Inspector

Project analysis

Select count file (max. 20 megabytes)

Select class file

Select comparison file

Select description file (Optional)

Number of rotations

P value threshold

Select an organism

Gene ID format

Organism name or taxa ID

Select the mapping file beetween KEGG and gene id

Select the Kingdom the specie belongs to:

Select an organism

P value threshold

Please enter your email

Pathway Inspector is a web application helping researchers to find patterns of expression in complex RNAseq experiments. The tool combines two standard approaches for RNAseq analysis: the identification of differentially expressed genes and a topology-based analysis of enriched pathways. Pathway Inspector is equipped with ad-hoc interactive graphical interfaces simplifying the discovery of modulated pathways and the integration of the differentially expressed genes in the corresponding pathway topology.